Structure of PDB 1jd0 Chain B

Receptor sequence
>1jd0B (length=259) Species: 9606 (Homo sapiens) [Search protein sequence]
WTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNL
SANKQFLLTNNGHSVKLNLPSDMHIQGLQSRYSATQLHLHWGNPNDPHGS
EHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNP
SYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCN
PTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFD
ERLVYTSFS
3D structure
PDB1jd0 Crystal structure of the dimeric extracellular domain of human carbonic anhydrase XII, a bitopic membrane protein overexpressed in certain cancer tumor cells.
ChainB
Resolution1.5 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) H64 H94 H96 E106 H119 T199
Catalytic site (residue number reindexed from 1) H63 H88 H90 E101 H114 T195
Enzyme Commision number 4.2.1.1: carbonic anhydrase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B H94 H96 H119 H88 H90 H114
BS02 AZM B Q92 H94 H119 V121 L198 T199 T200 Q86 H88 H114 V116 L194 T195 T196 BindingDB: Ki=5.7nM,Kd=130nM,IC50=60nM
Gene Ontology
Molecular Function
GO:0004089 carbonate dehydratase activity
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:1jd0, PDBe:1jd0, PDBj:1jd0
PDBsum1jd0
PubMed11493685
UniProtO43570|CAH12_HUMAN Carbonic anhydrase 12 (Gene Name=CA12)

[Back to BioLiP]