Structure of PDB 1ffk Chain B

Receptor sequence
>1ffkB (length=337) Species: 2238 (Haloarcula marismortui) [Search protein sequence]
PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQGFAGYKAGMTH
VVLVNDEPNSPREGMETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVW
TDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAV
PSVPKKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYAD
VAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTV
PQQGQTGYHQRTELNKRLIDIGEGDEPTVDGGFVNYGEVDGPYTLVKGSV
PGPDKRLVPFFRPAVRPNDQPRLDPEVRYVSNESNQG
3D structure
PDB1ffk The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
ChainB
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna B G9 G12 G14 T49 P115 G207 G209 G212 G230 G236 R245 G281 N285 G287 G298 G337 G9 G12 G14 T49 P115 G207 G209 G212 G230 G236 R245 G281 N285 G287 G298 G337
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1ffk, PDBe:1ffk, PDBj:1ffk
PDBsum1ffk
PubMed10937989
UniProtP20279|RL3_HALMA Large ribosomal subunit protein uL3 (Gene Name=rpl3)

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