Structure of PDB 1f2n Chain B

Receptor sequence
>1f2nB (length=189) Species: 31744 (Rice yellow mottle virus) [Search protein sequence]
LSSNTWPLHSVEFLADFKRSSTSADATTYDCVPFNLPRVWSLARCYSMWK
PTRWDVVYLPEVSATVAGSIEMCFLYDYADTIPRYTGKMSRTAGFVTSSV
WYGAEGCHLLSGGSARNAVVASMDCSRVGWKRVTSSIPSSVDPNVVNTIL
PARLAVRSSIKPTVSDTPGKLYVIASMVLRDPVDPTLNT
3D structure
PDB1f2n 3D domain swapping modulates the stability of members of an icosahedral virus group.
ChainB
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA B V182 N237 T238 V133 N188 T189
BS02 CA B D126 D129 D77 D80
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
GO:0046872 metal ion binding
Cellular Component
GO:0019028 viral capsid

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:1f2n, PDBe:1f2n, PDBj:1f2n
PDBsum1f2n
PubMed11080631
UniProtQ86527

[Back to BioLiP]