Structure of PDB 1dt7 Chain B
Receptor sequence
>1dt7B (length=92) Species:
10116
(Rattus norvegicus) [
Search protein sequence
]
MSELEKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKE
QEVVDKVMETLDEDGDGECDFQEFMAFVSMVTTACHEFFEHE
3D structure
PDB
1dt7
Structure of the negative regulatory domain of p53 bound to S100B(betabeta).
Chain
B
Resolution
N/A
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
peptide
B
E45 E46 I47 E49 E51 V52 K55 F76 M79 A83
E46 E47 I48 E50 E52 V53 K56 F77 M80 A84
BS02
CA
B
S18 D23 K24 K26 L27 E31
S19 D24 K25 K27 L28 E32
BS03
CA
B
D61 E62 D63 D65 E67 E72
D62 E63 D64 D66 E68 E73
Gene Ontology
Molecular Function
GO:0005102
signaling receptor binding
GO:0005509
calcium ion binding
GO:0005515
protein binding
GO:0008270
zinc ion binding
GO:0042802
identical protein binding
GO:0042803
protein homodimerization activity
GO:0044548
S100 protein binding
GO:0046872
metal ion binding
GO:0048156
tau protein binding
GO:0048306
calcium-dependent protein binding
GO:0050786
RAGE receptor binding
Biological Process
GO:0007155
cell adhesion
GO:0007611
learning or memory
GO:0007613
memory
GO:0008284
positive regulation of cell population proliferation
GO:0008360
regulation of cell shape
GO:0031643
positive regulation of myelination
GO:0043065
positive regulation of apoptotic process
GO:0043123
positive regulation of canonical NF-kappaB signal transduction
GO:0045666
positive regulation of neuron differentiation
GO:0048168
regulation of neuronal synaptic plasticity
GO:0048708
astrocyte differentiation
GO:0050806
positive regulation of synaptic transmission
GO:0051384
response to glucocorticoid
GO:0051597
response to methylmercury
GO:0060291
long-term synaptic potentiation
GO:0071456
cellular response to hypoxia
GO:0097490
sympathetic neuron projection extension
GO:1990138
neuron projection extension
GO:1990845
adaptive thermogenesis
GO:2001015
negative regulation of skeletal muscle cell differentiation
Cellular Component
GO:0001726
ruffle
GO:0005576
extracellular region
GO:0005615
extracellular space
GO:0005634
nucleus
GO:0005737
cytoplasm
GO:0043025
neuronal cell body
GO:0048471
perinuclear region of cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1dt7
,
PDBe:1dt7
,
PDBj:1dt7
PDBsum
1dt7
PubMed
10876243
UniProt
P04631
|S100B_RAT Protein S100-B (Gene Name=S100b)
[
Back to BioLiP
]