Structure of PDB 1d5y Chain B

Receptor sequence
>1d5yB (length=288) Species: 562 (Escherichia coli) [Search protein sequence]
QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGA
YIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQI
SDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTAL
AQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLN
LTRRKGQDIERYYPAEDDRPINLRCELLIPIRRKLAAA
3D structure
PDB1d5y Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA.
ChainB
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B R90 K94 R88 K92
BS02 dna B L24 D25 K43 A49 G51 L22 D23 K41 A47 G49
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1d5y, PDBe:1d5y, PDBj:1d5y
PDBsum1d5y
PubMed10802742
UniProtP0ACI0|ROB_ECOLI Right origin-binding protein (Gene Name=rob)

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