Structure of PDB 9f1d Chain Ax

Receptor sequence

>9f1dAx (length=125) Species: 9986 (Oryctolagus cuniculus)

TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPD
VIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTS
RKQRKERKNRMKKVRGTAKANVGAG

3D structure

• PDB: 9f1d NAC guides a ribosomal multienzyme complex for nascent protein processing.
• Chain: Ax
• Resolution: 3.26 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Ax	R8 K11 F12 M13 T14 K32 A33 T34 P36 K37 M47 Y48 G59 F60 R61 T62 H63 F64 G66 H89 R93 R104 K105 K108 K111 N112 K115 K116 R118 G119 T120 K122	R5 K8 F9 M10 T11 K29 A30 T31 P33 K34 M44 Y45 G56 F57 R58 T59 H60 F61 G63 H86 R90 R101 K102 K105 K108 N109 K112 K113 R115 G116 T117 K119

External links

• PDB: RCSB:9f1d, PDBe:9f1d, PDBj:9f1d
• PDBsum: 9f1d
• PubMed: 39169182
• UniProt: G1T3D8