Structure of PDB 9f1b Chain Aw

Receptor sequence

>9f1bAw (length=141) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

GKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIV
LEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVL
VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPR

3D structure

PDB

9f1b NAC guides a ribosomal multienzyme complex for nascent protein processing.

Chain

Resolution

3.01 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Aw	G2 K3 C4 R5 G6 R8 T9 R11 K12 H16 R17 R18 Q20 W22 H23 D24 K25 K28 L36 A44 S45 H46 A47 K48 K60 N63 S64 A65 I66 R67 K68 K76 N87 D88 G104 G106 R107 K108 H110 V112 G113 D114 R119 K121 K124 S129 L131 K137 K138	G1 K2 C3 R4 G5 R7 T8 R10 K11 H15 R16 R17 Q19 W21 H22 D23 K24 K27 L35 A43 S44 H45 A46 K47 K59 N62 S63 A64 I65 R66 K67 K75 N86 D87 G103 G105 R106 K107 H109 V111 G112 D113 R118 K120 K123 S128 L130 K136 K137

External links

PDB	RCSB:9f1b, PDBe:9f1b, PDBj:9f1b
PDBsum	9f1b
PubMed	39169182
UniProt	G1SZ47\|RS23_RABIT Small ribosomal subunit protein uS12 (Gene Name=RPS23)