Structure of PDB 6yxy Chain Av

Receptor sequence

>6yxyAv (length=196) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]

VKYTPMMLNIQNMMWWNGKRNLYRATYREKTWYEISRTGAFTKGRRPVMR
QKYSREALQAALAMVPPGFEVADVPRPPQRILAQSEGIVGRWYSNYWTLH
SMRYQCLLAGVEWPLGERQRPRTNYDEPFFFADFEESKAIRDYRSRWINV
NRSLVGMTKRMKEAEEEARYMQFRKLQDTFWSNRKVLVNRVKSMYN

3D structure

PDB

6yxy Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.

Chain

Resolution

3.1 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Av	M29 M37 W38 K42 L45 Y46 R47 A48 T49 R51 W55 Y56 R60 T61 G62 R68 P70 R73 K182 M194 Q195 K198 L199 T202 W204	M6 M14 W15 K19 L22 Y23 R24 A25 T26 R28 W32 Y33 R37 T38 G39 R45 P47 R50 K159 M171 Q172 K175 L176 T179 W181
BS02	NAD	Av	K66 R68 M72 K75 Y127 Q128 L131	K43 R45 M49 K52 Y104 Q105 L108

External links

PDB	RCSB:6yxy, PDBe:6yxy, PDBj:6yxy
PDBsum	6yxy
PubMed	32679035
UniProt	D0A934

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