Structure of PDB 8xjv Chain Ar

Receptor sequence

>8xjvAr (length=180) Species: 9031 (Gallus gallus) [Search protein sequence]

MTESLVLSPAPAKPKRVKASRRSASHPTYSEMIAAAIRAEKSRGGSSRQS
IQKYIKSQIKLSIRRLLAAGVLKQTKGVGASGSFRLAKSDKAKRSPGKKK
KAVRRSTSPKKAARPRKARSPAKKPKATARKARKKSRASPKKAKKPKTVK
AKSRKASKAKKVKRSKPRAKSGARKSPKKK

3D structure

PDB

8xjv Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.

Chain

Resolution

3.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	dna	Ar	L4 L6 S7 K14 R15 A18 S19 R47 L76 Q83 K85 G91 F93 A111 V112 R113 R123 R125 K135 A136 T137 R146 A147 K172	L5 L7 S8 K15 R16 A19 S20 R48 L67 Q74 K76 G82 F84 A102 V103 R104 R114 R116 K126 A127 T128 R137 A138 K163
BS02	dna	Ar	K12 R15 K55 S56 R74 V87 K133 K150 K153 K154 T157 V171 K175 P176 K179	K13 R16 K56 S57 R65 V78 K124 K141 K144 K145 T148 V162 K166 P167 K170

External links

PDB	RCSB:8xjv, PDBe:8xjv, PDBj:8xjv
PDBsum	8xjv
PubMed	39103524
UniProt	P02259\|H5_CHICK Histone H5

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