Structure of PDB 8xjv Chain Ap

Receptor sequence
>8xjvAp (length=73) Species: 9031 (Gallus gallus) [Search protein sequence]
ASHPTYSEMIAAAIRAEKSRGGSSRQSIQKYIKSHYKVGHNADLQIKLSI
RRLLAAGVLKQTKGVGASGSFRL
3D structure
PDB8xjv Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.
ChainAp
Resolution3.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna Ap H57 V60 Q83 T84 K85 G86 V87 G88 A89 H35 V38 Q61 T62 K63 G64 V65 G66 A67
BS02 dna Ap H25 K59 H62 N63 Q67 K69 I72 R73 L76 Q83 H3 K37 H40 N41 Q45 K47 I50 R51 L54 Q61
External links
PDB RCSB:8xjv, PDBe:8xjv, PDBj:8xjv
PDBsum8xjv
PubMed39103524
UniProtP02259|H5_CHICK Histone H5

[Back to BioLiP]