Structure of PDB 8q87 Chain Ap

Receptor sequence

>8q87Ap (length=141) Species: 9031 (Gallus gallus)

PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPV
LLLGKERFAGVDIRVRVKGGGHVAQIYAIRQAISKALVAYYQKYVDEASK
KEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR

3D structure

• PDB: 8q87 Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells
• Chain: Ap
• Resolution: 2.4 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Ap	Q11 V12 F13 R15 K16 K17 T18 H24 K33 G36 R37 R69 R71 K73 G74 G75 G76 H77 V78 A79 Q80 R117 V121 R125 R126 C127 E128 S129 K130 K131 F132 G133 R138 A139 R140 Y141 Q142 K143 S144 Y145 R146	Q6 V7 F8 R10 K11 K12 T13 H19 K28 G31 R32 R64 R66 K68 G69 G70 G71 H72 V73 A74 Q75 R112 V116 R120 R121 C122 E123 S124 K125 K126 F127 G128 R133 A134 R135 Y136 Q137 K138 S139 Y140 R141

External links

• PDB: RCSB:8q87, PDBe:8q87, PDBj:8q87
• PDBsum: 8q87
• UniProt: R4GGJ0