Structure of PDB 6gaw Chain Ap

Receptor sequence
>6gawAp (length=190) Species: 9823 (Sus scrofa) [Search protein sequence]
SPYKDEPWKYLDSEEYQNRYGSRPVWADYRRNHKGGIPPQRTRKMCIRGN
KVAGNPCPICRDQKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHK
KLTQAIQKARDHGLLRYHIPQVEPRDLDFSTTHGAVSSTPPAPTLVSGDP
WYPWYSWKQPPERELSRLRRLYQGRLREESGPPPELMPEV
3D structure
PDB6gaw Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM.
ChainAp
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Ap N80 K82 I85 Q88 R91 K92 R96 K148 N32 K34 I37 Q40 R43 K44 R48 K100
BS02 ZN Ap C94 C105 C108 C143 C46 C57 C60 C95
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6gaw, PDBe:6gaw, PDBj:6gaw
PDBsum6gaw
PubMed30089917
UniProtQ767K8|RT18B_PIG Small ribosomal subunit protein mS40 (Gene Name=MRPS18B)

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