Structure of PDB 9f1b Chain Ao

Receptor sequence

>9f1bAo (length=128) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

TFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLSRGLRRKQHSLLKRL
RKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPE
MIGHYLGEFSITYKPVKHGRPGIGATHS

3D structure

PDB

9f1b NAC guides a ribosomal multienzyme complex for nascent protein processing.

Chain

Resolution

3.01 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Ao	T136 H137	T126 H127
BS02	rna	Ao	R18 S38 A39 R40 R42 R43 R44 R47 R50 R51 K77 H79 R81 D82 Y97 N98 G99 K100 F102 Y115 G117 E118 I121 T122 Y123 V126 K127 H128 G129 P131 G132 I133 G134 A135	R8 S28 A29 R30 R32 R33 R34 R37 R40 R41 K67 H69 R71 D72 Y87 N88 G89 K90 F92 Y105 G107 E108 I111 T112 Y113 V116 K117 H118 G119 P121 G122 I123 G124 A125

External links

PDB	RCSB:9f1b, PDBe:9f1b, PDBj:9f1b
PDBsum	9f1b
PubMed	39169182
UniProt	G1U0Q2\|RS15_RABIT Small ribosomal subunit protein uS19 (Gene Name=RPS15)