Structure of PDB 9f1b Chain Am

Receptor sequence

>9f1bAm (length=150) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

GRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIG
VILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKH
LERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA

3D structure

PDB

9f1b NAC guides a ribosomal multienzyme complex for nascent protein processing.

Chain

Resolution

3.01 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Am	H123 K140	H122 K139
BS02	rna	Am	G2 R3 M4 H5 P7 G8 K9 G10 L11 S12 Q13 S14 A15 L16 P17 R20 S48 G51 V52 R55 A61 Q62 R64 K70 I71 L72 R73 E86 D87 H90 L91 K94 H101 N105 K107 D108 K109 D110 K112 F113 R114 I116 L117 S120 R121 R124 R127 Y128 K132	G1 R2 M3 H4 P6 G7 K8 G9 L10 S11 Q12 S13 A14 L15 P16 R19 S47 G50 V51 R54 A60 Q61 R63 K69 I70 L71 R72 E85 D86 H89 L90 K93 H100 N104 K106 D107 K108 D109 K111 F112 R113 I115 L116 S119 R120 R123 R126 Y127 K131

External links

PDB	RCSB:9f1b, PDBe:9f1b, PDBj:9f1b
PDBsum	9f1b
PubMed	39169182
UniProt	G1SP51\|RS13_RABIT Small ribosomal subunit protein uS15 (Gene Name=RPS13)

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