Structure of PDB 6p5j Chain Am

Receptor sequence
>6p5jAm (length=52) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKK
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3D structure
PDB6p5j The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
ChainAm
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Am K67 I69 R71 Y74 A75 R76 H78 R80 V82 N83 R85 K86 K87 K88 C89 G90 H91 N93 R96 K98 K99 K17 I19 R21 Y24 A25 R26 H28 R30 V32 N33 R35 K36 K37 K38 C39 G40 H41 N43 R46 K48 K49
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Wed Apr 9 16:36:32 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '6p5j', asym_id = 'Am', title = 'The Israeli acute paralysis virus IRES captures ...by mimicking a ribosomal state with hybrid tRNAs.'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='6p5j', asym_id='Am', title='The Israeli acute paralysis virus IRES captures ...by mimicking a ribosomal state with hybrid tRNAs.')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003735,0005840,0006412', uniprot = '', pdbid = '6p5j', asym_id = 'Am'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412', uniprot='', pdbid='6p5j', asym_id='Am')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>