Structure of PDB 6gz3 Chain Aj

Receptor sequence

>6gz3Aj (length=84) Species: 9986 (Oryctolagus cuniculus)

TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSA
KAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPK

3D structure

• PDB: 6gz3 tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
• Chain: Aj
• Resolution: 3.6 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Aj	T2 K3 T5 S6 F8 G9 K10 R11 R12 N13 K14 T15 H16 H28 Q30 G35 K42 R43 K44 R45 K46 Y47 N48 W49 K52 R55 R56 T58 Y71 R75 R79	T1 K2 T4 S5 F7 G8 K9 R10 R11 N12 K13 T14 H15 H27 Q29 G34 K41 R42 K43 R44 K45 Y46 N47 W48 K51 R54 R55 T57 Y70 R74 R78
BS02	rna	Aj	R20 R21 Y39 T59 G62 R63 M64 R65 H66 Y71 R72 F74 H76 R79 E80 G81 T82 T83 K85	R19 R20 Y38 T58 G61 R62 M63 R64 H65 Y70 R71 F73 H75 R78 E79 G80 T81 T82 K84
BS03	ZN	Aj	C19 C37	C18 C36

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome

External links

• PDB: RCSB:6gz3, PDBe:6gz3, PDBj:6gz3
• PDBsum: 6gz3
• PubMed: 30517857
• UniProt: U3KPD5|RL37_RABIT Large ribosomal subunit protein eL37 (Gene Name=RPL37)