Structure of PDB 8xjv Chain Ai

Receptor sequence

>8xjvAi (length=170) Species: 9031 (Gallus gallus) [Search protein sequence]

MTESLVLSPAPAKPKRVKASRRSASHPTYSEMIAAAIRAEKSRGGSSRQS
IQKYIKSHYKVGHNADLQIKLSIRRLLAAGVLKQTKGVGASGSFRLAKSD
KAKRSPGKKKKAVRRSTSPKKAARPRKARSPAKKPKATARKARKKSRASP
KKAKKPKTVKAKSRKASKAK

3D structure

PDB

8xjv Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.

Chain

Resolution

3.6 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	dna	Ai	T84 K85 G86 A89 S90 S92 S98 K100 R114 S117 P118 A121 R125	T85 K86 G87 A90 S91 S93 S99 K101 R115 S118 P119 A122 R126
BS02	dna	Ai	P13 G61 H62 N63 K69 I72 R73 R74 L75 L76 F93 K100 R103 S104 K107 R125 K151 V158 K159 S166	P14 G62 H63 N64 K70 I73 R74 R75 L76 L77 F94 K101 R104 S105 K108 R126 K152 V159 K160 S167

External links

PDB	RCSB:8xjv, PDBe:8xjv, PDBj:8xjv
PDBsum	8xjv
PubMed	39103524
UniProt	P02259\|H5_CHICK Histone H5

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