Structure of PDB 6p5i Chain Ai

Receptor sequence
>6p5iAi (length=102) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
ALRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFA
PYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSSVLAAMRKAA
AK
3D structure
PDB6p5i The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
ChainAi
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Ai R4 G14 H15 V17 H26 S27 R28 R29 R30 G31 L33 T34 H36 T37 R41 Y53 E59 K67 R68 K74 K75 R76 V77 G78 T79 H80 R82 K84 R85 K86 R3 G13 H14 V16 H25 S26 R27 R28 R29 G30 L32 T33 H35 T36 R40 Y52 E58 K66 R67 K73 K74 R75 V76 G77 T78 H79 R81 K83 R84 K85
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6p5i, PDBe:6p5i, PDBj:6p5i
PDBsum6p5i
PubMed31609474
UniProtG1TTQ5|RL36_RABIT Large ribosomal subunit protein eL36 (Gene Name=RPL36)

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