Structure of PDB 8q87 Chain Ah

Receptor sequence

>8q87Ah (length=203) Species: 9031 (Gallus gallus) [Search protein sequence]

GISRDNWHKRRKTGGKRKPYHKKRKYELGRPPANTKIGPRRIHTVRVRGG
NKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCI
VLVDSTPYRQWYEAHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDE
RKKNAKIASILEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRK
IKA

3D structure

PDB

8q87 Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells

Chain

Resolution

2.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Ah	R92 E164 Q168	R91 E163 Q167
BS02	rna	Ah	G2 I3 R5 D6 N7 H9 K10 R11 R12 K13 T14 G16 K17 K19 Y21 H22 K23 K24 R25 K26 Y27 L29 R31 P32 P33 A34 R42 I43 H44 T45 R47 V48 R49 G50 G51 N52 K53 K54 Y55 R56 L58 R59 N64 S66 T73 R74 S86 N87 V97 K98 N99 K139 K140 K144 I145 K148 Y149 R152 R178 G180 Q181 C182 G183 R184 G187	G1 I2 R4 D5 N6 H8 K9 R10 R11 K12 T13 G15 K16 K18 Y20 H21 K22 K23 R24 K25 Y26 L28 R30 P31 P32 A33 R41 I42 H43 T44 R46 V47 R48 G49 G50 N51 K52 K53 Y54 R55 L57 R58 N63 S65 T72 R73 S85 N86 V96 K97 N98 K138 K139 K143 I144 K147 Y148 R151 R177 G179 Q180 C181 G182 R183 G186

External links

PDB	RCSB:8q87, PDBe:8q87, PDBj:8q87
PDBsum	8q87
PubMed
UniProt	F1NB02

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