Structure of PDB 4v5z Chain Ah

Receptor sequence
>4v5zAh (length=127) Species: 9615 (Canis lupus familiaris) [Search protein sequence]
MNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII
DDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIV
LTTSAGIMDHEEARRKHTGGKILGFFF
3D structure
PDB4v5z Structure of the Mammalian 80S Ribosome at 8.7 A Resolution
ChainAh
Resolution8.7 Å
3D
structure
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Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna Ah V6 S31 K32 R78 D80 V81 Q82 L83 H120 V3 S28 K29 R75 D77 V78 Q79 L80 H117
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Tue Dec 3 03:58:18 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '4v5z', asym_id = 'Ah', title = 'Structure of the Mammalian 80S Ribosome at 8.7 A Resolution'
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='4v5z', asym_id='Ah', title='Structure of the Mammalian 80S Ribosome at 8.7 A Resolution')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0003735,0005840,0006412', uniprot = '', pdbid = '4v5z', asym_id = 'Ah'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412', uniprot='', pdbid='4v5z', asym_id='Ah')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>