Structure of PDB 6gaz Chain Ag

Receptor sequence
>6gazAg (length=353) Species: 9823 (Sus scrofa) [Search protein sequence]
RAISRTSEDDPAKHREQHEGQHYNISLQELKTVFPHGLPPRFAMQVKTFN
EACLMVRKPALELLHYLKNTNFAHPAVRYVLYGEKGTGKTLSLCHILHFC
AKQNWLILHIPDAHIWVKNCRDLLQSNYNKQRFDQPLEASTWLKNFKTAN
EHFLSQIKVQEKYVWNKRESTEKGRPLGEVVEQGIMRVRNATDAVGIVLK
ELKRQSSLGIFHLLVAVDGVNALWGRTTLKREDKSPIAPEELALIHNLRK
MVKNDWQGGAIVLTVSQTGSLFKPRNAYLPQELLGKEGFDALDPFIPILV
SNYNPKEFESCIQYYLENNWLQHEKAHTEEGKKELLFLSNRNPGQLERLC
AYL
3D structure
PDB6gaz Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM.
ChainAg
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Ag K129 K162 N163 R165 L315 F316 K317 R319 G388 Q389 R392 K85 K118 N119 R121 L271 F272 K273 R275 G344 Q345 R348
BS02 GTP Ag M99 R101 G130 T131 G132 K133 T134 L135 T312 P387 G388 M55 R57 G86 T87 G88 K89 T90 L91 T268 P343 G344
Gene Ontology
Biological Process
GO:0006915 apoptotic process
Cellular Component
GO:0005654 nucleoplasm
GO:0005739 mitochondrion
GO:0005761 mitochondrial ribosome
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:6gaz, PDBe:6gaz, PDBj:6gaz
PDBsum6gaz
PubMed30089917
UniProtA0A8D1XNL0

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