Structure of PDB 5ngm Chain Ag

Receptor sequence
>5ngmAg (length=152) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLV
EQRSGRDALEVFEEAINNIMPVLEVKARRVGGSNYQVPVEVRPERRTTLG
LRWLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKA
FA
3D structure
PDB5ngm The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus.
ChainAg
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Ag P2 R3 K4 S6 V7 R10 K25 N28 I30 M31 L32 D33 G34 K35 R36 G37 T38 R41 I42 R79 G82 R95 T98 R102 R109 E113 K114 T115 M116 P2 R3 K4 S6 V7 R10 K25 N28 I30 M31 L32 D33 G34 K35 R36 G37 T38 R41 I42 R79 G82 R95 T98 R102 R109 E113 K114 T115 M116
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ngm, PDBe:5ngm, PDBj:5ngm
PDBsum5ngm
PubMed28959035
UniProtA0A077VHU6

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