Structure of PDB 4v7k Chain Ag

Receptor sequence
>4v7kAg (length=155) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQ
EKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLAL
RWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAY
AHYRW
3D structure
PDB4v7k The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
ChainAg
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Ag A2 R3 R4 R6 A7 R10 N28 K29 I30 M31 R32 D33 G34 K36 N37 L38 I42 R78 Y85 R95 S98 R102 R114 A116 A1 R2 R3 R5 A6 R9 N27 K28 I29 M30 R31 D32 G33 K35 N36 L37 I41 R77 Y84 R94 S97 R101 R113 A115
BS02 rna Ag Q86 R143 M144 A147 Q85 R142 M143 A146
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v7k, PDBe:4v7k, PDBj:4v7k
PDBsum4v7k
PubMed20005802
UniProtP17291|RS7_THET8 Small ribosomal subunit protein uS7 (Gene Name=rpsG)

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