Structure of PDB 8q87 Chain Aa

Receptor sequence

>8q87Aa (length=213) Species: 9031 (Gallus gallus) [Search protein sequence]

VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS
LADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM
IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMME
IMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKK
PKFELGKLMELHG

3D structure

PDB

8q87 Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells

Chain

Resolution

2.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	Aa	P24 K28 S112 V114 K115 K116 W117 Q118 M120 H124 R136 F138 R146 N148 Q149 I150 R151 Y155 Q157 H158 Q159 Q160 R162 R165 Q202 S203 I204 Y205 P206 K214 K216	P4 K8 S92 V94 K95 K96 W97 Q98 M100 H104 R116 F118 R126 N128 Q129 I130 R131 Y135 Q137 H138 Q139 Q140 R142 R145 Q182 S183 I184 Y185 P186 K194 K196

External links

PDB	RCSB:8q87, PDBe:8q87, PDBj:8q87
PDBsum	8q87
PubMed

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