Structure of PDB 8ove Chain AY

Receptor sequence
>8oveAY (length=59) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
SLARAGKVKNQTPKVSKQEKKKQPRGRAFKRLKYTQRYLAKTLKAGEKLR
MNKQPPGKA
3D structure
PDB8ove A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
ChainAY
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AY R10 G12 K13 V14 V21 K23 Q24 K28 R31 R33 F35 R43 T48 R56 N58 Q60 G63 A65 R4 G6 K7 V8 V15 K17 Q18 K22 R25 R27 F29 R37 T42 R50 N52 Q54 G57 A59
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005829 cytosol
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ove, PDBe:8ove, PDBj:8ove
PDBsum8ove
PubMed37985661
UniProtQ584U5

[Back to BioLiP]