Structure of PDB 8ova Chain AX

Receptor sequence
>8ovaAX (length=208) Species: 5702 (Trypanosoma brucei brucei) [Search protein sequence]
PLSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRST
KTREVLGEKGRRIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAE
SLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKIKGQRAKSMTFR
DGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRPQSMIEEDEVLPD
VITVIEPK
3D structure
PDB8ova A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei.
ChainAX
Resolution2.47 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AX P3 S5 K6 K7 R8 K140 Q144 R145 A146 Y155 M156 K158 S159 G160 T161 H173 H175 T180 P201 D202 P1 S3 K4 K5 R6 K138 Q142 R143 A144 Y153 M154 K156 S157 G158 T159 H171 H173 T178 P199 D200
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0015935 small ribosomal subunit

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ova, PDBe:8ova, PDBj:8ova
PDBsum8ova
PubMed37985661
UniProtQ38EW1

[Back to BioLiP]