Structure of PDB 4v4n Chain AX

Receptor sequence
>4v4nAX (length=432) Species: 2190 (Methanocaldococcus jannaschii) [Search protein sequence]
KKLIPILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQ
IPAIFEFWQTITASRIGTLITLGIGPIVTAGIIMQLLVGSGIIQMDLSIP
ENRALFQGCQKLLSIIMCFVEAVLFVGAGAFGILTPLLAFLVIIQIAFGS
IILIYLDEIVSKYGIGSGIGLFIAAGVSQTIFVGALGPEGYLWKFLNSLI
QGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKF
VYVSNIPVILAAALFANIQLWGLALYRMGIPILGHYEGGRAVDGIAYYLS
TPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGS
LGMAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGGG
TGVLLTVSIVYRMYEQLLREKVSELHPAIAKL
3D structure
PDB4v4n Structure of the SecY channel during initiation of protein translocation.
ChainAX
Resolution9.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AX R239 I240 K241 F359 K361 P428 A429 R238 I239 K240 F358 K360 P427 A428
Gene Ontology
Molecular Function
GO:0005048 signal sequence binding
GO:0008320 protein transmembrane transporter activity
Biological Process
GO:0006605 protein targeting
GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation
GO:0015031 protein transport
GO:0065002 intracellular protein transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v4n, PDBe:4v4n, PDBj:4v4n
PDBsum4v4n
PubMed24153188
UniProtQ60175|SECY_METJA Protein translocase subunit SecY (Gene Name=secY)

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