Structure of PDB 3j9m Chain AX

Receptor sequence
>3j9mAX (length=316) Species: 9606 (Homo sapiens) [Search protein sequence]
TNENDPAKHGDQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLM
VRKPALELLHYLKNTSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDW
LILHIPDAHLWVKNCRDLRFDQPLEASTWLKNFKTTNSPLGEVVEQGITR
VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPI
APEELALVHNLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKE
GFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEGKKELLF
LSNANPSLLERHCAYL
3D structure
PDB3j9m Ribosome. The structure of the human mitochondrial ribosome.
ChainAX
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AX K130 K163 N164 R166 K279 T313 F317 K318 P319 R320 L390 R393 K80 K113 N114 R116 K197 T231 F235 K236 P237 R238 L308 R311
BS02 GDP AX M100 K130 G131 G133 K134 T135 L136 T313 P388 E392 M50 K80 G81 G83 K84 T85 L86 T231 P306 E310
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0005525 GTP binding
Biological Process
GO:0006915 apoptotic process
GO:0032543 mitochondrial translation
GO:0097190 apoptotic signaling pathway
Cellular Component
GO:0005654 nucleoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005761 mitochondrial ribosome
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:3j9m, PDBe:3j9m, PDBj:3j9m
PDBsum3j9m
PubMed25838379
UniProtP51398|RT29_HUMAN Small ribosomal subunit protein mS29 (Gene Name=DAP3)

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