Structure of PDB 5a9z Chain AW

Receptor sequence
>5a9zAW (length=180) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MEYRLKAYYREGEKPSALRRAGKLPGVMYNRHLNRKVYVDLVEFDKVFRQ
ASIHHVIVLELPDGQSLPTLVRQVNLDKRRRRPEHVDFFVLSDEPVEMYV
PLRFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSL
HASDLKLPPGVELAVSPEETIAAVVPPEDV
3D structure
PDB5a9z Structure of Bipa in GTP Form Bound to the Ratcheted Ribosome.
ChainAW
Resolution4.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AW E119 H121 R122 S149 E169 T170 E119 H121 R122 S149 E169 T170
BS02 rna AW E11 R19 V27 Y29 R31 H32 N34 K36 R72 Q73 N75 K78 E84 H85 D87 F89 E97 E11 R19 V27 Y29 R31 H32 N34 K36 R72 Q73 N75 K78 E84 H85 D87 F89 E97
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome

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Cellular Component
External links
PDB RCSB:5a9z, PDBe:5a9z, PDBj:5a9z
PDBsum5a9z
PubMed26283392
UniProtQ5SHZ1|RL25_THET8 Large ribosomal subunit protein bL25 (Gene Name=rplY)

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