Structure of PDB 4v8g Chain AV
Receptor sequence
>4v8gAV (length=53) Species:
83333
(Escherichia coli K-12) [
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RQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGWREAMADRV
VMA
3D structure
PDB
4v8g
How hibernation factors RMF, HPF, and YfiA turn off protein synthesis.
Chain
AV
Resolution
3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
AV
R3 R15 Y31 Q32 Q39
R1 R13 Y29 Q30 Q37
Gene Ontology
Molecular Function
GO:0019843
rRNA binding
GO:0043022
ribosome binding
GO:0043024
ribosomal small subunit binding
Biological Process
GO:0006417
regulation of translation
GO:0022611
dormancy process
GO:0032055
negative regulation of translation in response to stress
GO:0033554
cellular response to stress
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4v8g
,
PDBe:4v8g
,
PDBj:4v8g
PDBsum
4v8g
PubMed
22605777
UniProt
P0AFW2
|RMF_ECOLI Ribosome modulation factor (Gene Name=rmf)
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