Structure of PDB 4v7i Chain AU

Receptor sequence

>4v7iAU (length=102) Species: 83333 (Escherichia coli K-12) [Search protein sequence]

AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPA
LNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSE
TI

3D structure

PDB

4v7i Regulation of the protein-conducting channel by a bound ribosome.

Chain

Resolution

9.6 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	AU	A1 K3 R5 R6 L13 T14 G15 K16 K18 N26 V27 K42 K43 H44 Q45 K46 P47 Q53 P54 G55 G56 I57 Q65 V66 S67 N68 V69 K78 A79 D80 R81 G83 F84 R85 G89 K90 K91 F94 K96	A1 K3 R5 R6 L13 T14 G15 K16 K18 N26 V27 K42 K43 H44 Q45 K46 P47 Q53 P54 G55 G56 I57 Q65 V66 S67 N68 V69 K78 A79 D80 R81 G83 F84 R85 G89 K90 K91 F94 K96

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding
GO:0019843	rRNA binding
GO:0070180	large ribosomal subunit rRNA binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:4v7i, PDBe:4v7i, PDBj:4v7i
PDBsum	4v7i
PubMed	19913480
UniProt	P60624\|RL24_ECOLI Large ribosomal subunit protein uL24 (Gene Name=rplX)