Structure of PDB 6gz3 Chain AT

Receptor sequence

>6gz3AT (length=157) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

TNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKG
MPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKS
RDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELL
EPIPYEF

3D structure

PDB

6gz3 tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.

Chain

Resolution

3.6 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	AT	T2 N3 T4 K5 G6 K7 R8 R9 R12 Y13 M14 S16 F19 H22 G23 K35 I39 D41 K43 G46 T47 Q49 K50 H54 K55 H58 G59 K60 T61 T68 Q69 H70 A71 K81 K87 R88 N90 K100 S101 F105 V109 K116 W125 L128 K129 R130 P132 F140 R142	T1 N2 T3 K4 G5 K6 R7 R8 R11 Y12 M13 S15 F18 H21 G22 K34 I38 D40 K42 G45 T46 Q48 K49 H53 K54 H57 G58 K59 T60 T67 Q68 H69 A70 K80 K86 R87 N89 K99 S100 F104 V108 K115 W124 L127 K128 R129 P131 F139 R141
BS02	rna	AT	R20 A28	R19 A27

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005783	endoplasmic reticulum
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:6gz3, PDBe:6gz3, PDBj:6gz3
PDBsum	6gz3
PubMed	30517857
UniProt	G1SHQ2\|RL21_RABIT Large ribosomal subunit protein eL21 (Gene Name=RPL21)

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