Structure of PDB 8wq2 Chain AS2P

Receptor sequence
>8wq2AS2P (length=196) Species: 330779 (Sulfolobus acidocaldarius DSM 639) [Search protein sequence]
ELLVPLDTYLSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLR
VAAKFISRFRPEAVLTVASRPYAFTPVQKFSEVVRGKEISGRFPPGTLTN
PYLDNYIEPEVLIVTDPRTDLQAIKEASKVGIPIVAFTDTDARVDFIDVI
IPANNKGRKSLALLYWVLARQILRERKEIPLDGDIPLRVEDFETRL
3D structure
PDB8wq2 Structural basis of translation inhibition by a valine tRNA-derived fragment
ChainAS2P
Resolution4.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AS2P R50 R119 P121 P122 G123 N127 D131 Q149 R23 R92 P94 P95 G96 N100 D104 Q122
BS02 UNK AS2P K81 R85 K54 R58
BS03 UNK AS2P D172 F173 D145 F146
BS04 UNK AS2P K81 F82 K54 F55
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8wq2, PDBe:8wq2, PDBj:8wq2
PDBsum8wq2
PubMed38599770
UniProtP39478|RS2_SULAC Small ribosomal subunit protein uS2 (Gene Name=rps2)

[Back to BioLiP]