Structure of PDB 9bdn Chain AS07

Receptor sequence
>9bdnAS07 (length=185) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
AKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGG
GRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPT
RKSKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLD
KAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL
3D structure
PDB9bdn Structural mechanism of angiogenin activation by the ribosome.
ChainAS07
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AS07 V66 R98 R99 L101 P102 K103 R106 K107 S108 Q114 K115 R116 R118 R120 T121 L122 V61 R93 R94 L96 P97 K98 R101 K102 S103 Q105 K106 R107 R109 R111 T112 L113
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006364 rRNA processing
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005813 centrosome
GO:0005840 ribosome
GO:0005856 cytoskeleton
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0030686 90S preribosome
GO:0032040 small-subunit processome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:9bdn, PDBe:9bdn, PDBj:9bdn
PDBsum9bdn
PubMed38718836
UniProtG1SVB0|RS7_RABIT Small ribosomal subunit protein eS7 (Gene Name=RPS7)

[Back to BioLiP]