Structure of PDB 6n1d Chain AS07

Receptor sequence
>6n1dAS07 (length=155) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQ
EKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLAL
RWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAY
AHYRW
3D structure
PDB6n1d Spontaneous ribosomal translocation of mRNA and tRNAs into a chimeric hybrid state.
ChainAS07
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AS07 A2 R3 R4 R5 R6 R10 K29 I30 M31 R32 G34 K35 K36 L38 I42 R76 R79 S98 R102 R114 R115 A116 R119 A1 R2 R3 R4 R5 R9 K28 I29 M30 R31 G33 K34 K35 L37 I41 R75 R78 S97 R101 R113 R114 A115 R118
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6n1d, PDBe:6n1d, PDBj:6n1d
PDBsum6n1d
PubMed30936299
UniProtP62667|RS7_THET2 Small ribosomal subunit protein uS7 (Gene Name=rpsG)

[Back to BioLiP]