Structure of PDB 4v9a Chain AM

Receptor sequence
>4v9aAM (length=99) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRG
PFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKTV
3D structure
PDB4v9a Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis.
ChainAM
Resolution3.2999 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AM R5 H13 G36 P37 I38 P39 L40 P41 T42 R43 V44 R45 R46 T48 R51 G52 P53 F54 K55 H56 K57 S59 R60 H62 H68 R70 D73 R3 H11 G34 P35 I36 P37 L38 P39 T40 R41 V42 R43 R44 T46 R49 G50 P51 F52 K53 H54 K55 S57 R58 H60 H66 R68 D71
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v9a, PDBe:4v9a, PDBj:4v9a
PDBsum4v9a
PubMed23431179
UniProtQ5SHN7|RS10_THET8 Small ribosomal subunit protein uS10 (Gene Name=rpsJ)

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