Structure of PDB 4v6s Chain AM

Receptor sequence
>4v6sAM (length=123) Species: 562 (Escherichia coli) [Search protein sequence]
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRG
KVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIF
GPVTRELRSEKFMKIISLAPEVL
3D structure
PDB4v6s Structural characterization of mRNA-tRNA translocation intermediates.
ChainAM
Resolution13.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AM I2 Q3 E4 Q5 T6 M7 R17 R18 M20 I22 K23 L25 G26 G27 S28 H29 R30 R31 K40 T42 K44 K66 K67 R70 G74 V76 R78 N82 I2 Q3 E4 Q5 T6 M7 R17 R18 M20 I22 K23 L25 G26 G27 S28 H29 R30 R31 K40 T42 K44 K66 K67 R70 G74 V76 R78 N82
BS02 rna AM P48 R49 L123 P48 R49 L123
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4v6s, PDBe:4v6s, PDBj:4v6s
PDBsum4v6s
PubMed22467828
UniProtP0ADY3|RL14_ECOLI Large ribosomal subunit protein uL14 (Gene Name=rplN)

[Back to BioLiP]