Structure of PDB 4v5h Chain AM

Receptor sequence
>4v5hAM (length=113) Species: 562 (Escherichia coli) [Search protein sequence]
ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEG
QIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQR
TKTNARTRKGPRK
3D structure
PDB4v5h Structural insight into nascent polypeptide chain-mediated translational stalling.
ChainAM
Resolution5.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AM K12 H13 I16 Y22 G23 V24 G25 K26 T27 R28 R69 Y85 P95 V96 R97 Q99 R100 T101 K102 T103 N104 A105 R106 R108 K109 R112 K12 H13 I16 Y22 G23 V24 G25 K26 T27 R28 R69 Y85 P95 V96 R97 Q99 R100 T101 K102 T103 N104 A105 R106 R108 K109 R112
BS02 rna AM M80 R91 M80 R91
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:4v5h, PDBe:4v5h, PDBj:4v5h
PDBsum4v5h
PubMed19933110
UniProtP0A7S9|RS13_ECOLI Small ribosomal subunit protein uS13 (Gene Name=rpsM)

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