Structure of PDB 9bdn Chain AL37

Receptor sequence

>9bdnAL37 (length=86) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSA
KAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK

3D structure

PDB

9bdn Structural mechanism of angiogenin activation by the ribosome.

Chain

AL37

Resolution

3.1 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	AL37	T2 K3 G4 T5 S6 S7 F8 G9 K10 R11 R12 N13 T15 H16 K25 Q30 K31 G35 K36 R43 K44 R45 K46 Y47 N48 W49 K52 R55 R56 T59 Y71 E80 G81	T1 K2 G3 T4 S5 S6 F7 G8 K9 R10 R11 N12 T14 H15 K24 Q29 K30 G34 K35 R42 K43 R44 K45 Y46 N47 W48 K51 R54 R55 T58 Y70 E79 G80
BS02	rna	AL37	R20 R21 Y39 N57 T58 T59 T61 G62 R63 M64 R65 H66 L67 V70 R72 F74 H76 R79 E80 G81 T82 T83 P84 K87	R19 R20 Y38 N56 T57 T58 T60 G61 R62 M63 R64 H65 L66 V69 R71 F73 H75 R78 E79 G80 T81 T82 P83 K86

External links

PDB	RCSB:9bdn, PDBe:9bdn, PDBj:9bdn
PDBsum	9bdn
PubMed	38718836
UniProt	U3KPD5\|RL37_RABIT Large ribosomal subunit protein eL37 (Gene Name=RPL37)