Structure of PDB 4v6i Chain AJ

Receptor sequence
>4v6iAJ (length=112) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
VEEQEQQQQIIKIRITLTSTKVKQLENVSSNIVKNAEQHNLVKKGPVRLP
TKVLKISTRKTPNGEGSKTWETYEMRIHKRYIDLEAPVQIVKRITQITIE
PGVDVEVVVASN
3D structure
PDB4v6i Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
ChainAJ
Resolution8.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AJ L58 R68 T70 P71 N72 G73 E74 G75 W79 T81 Y82 K88 R89 Y90 L49 R59 T61 P62 N63 G64 E65 G66 W70 T72 Y73 K79 R80 Y81
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v6i, PDBe:4v6i, PDBj:4v6i
PDBsum4v6i
PubMed20980660
UniProtP38701|RS20_YEAST Small ribosomal subunit protein uS10 (Gene Name=RPS20)

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