Structure of PDB 8fiz Chain AG

Receptor sequence
>8fizAG (length=206) Species: 562 (Escherichia coli) [Search protein sequence]
GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS
VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI
NIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKV
EVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW
IFKGEI
3D structure
PDB8fiz A trailing ribosome speeds up RNA polymerase at the expense of transcript fidelity via force and allostery.
ChainAG
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AG G2 Q3 K4 V5 R127 R156 E161 I162 A163 R169 V173 P174 H176 T177 L178 R179 E188 V195 K199 G1 Q2 K3 V4 R126 R155 E160 I161 A162 R168 V172 P173 H175 T176 L177 R178 E187 V194 K198
BS02 rna AG R131 R132 R164 R130 R131 R163
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fiz, PDBe:8fiz, PDBj:8fiz
PDBsum8fiz
PubMed36931247
UniProtP0A7V3|RS3_ECOLI Small ribosomal subunit protein uS3 (Gene Name=rpsC)

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