Structure of PDB 4v5a Chain AG

Receptor sequence

>4v5aAG (length=155) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]

ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQ
EKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLAL
RWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAY
AHYRW

3D structure

PDB

4v5a Crystal structure of the ribosome recycling factor bound to the ribosome.

Chain

Resolution

3.5 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	AG	A2 R3 R4 R6 A7 R10 K29 I30 M31 D33 G34 K35 K36 N37 L38 R41 I42 R76 R79 R94 R95 S98 R102 N109 R114 A116 W156	A1 R2 R3 R5 A6 R9 K28 I29 M30 D32 G33 K34 K35 N36 L37 R40 I41 R75 R78 R93 R94 S97 R101 N108 R113 A115 W155
BS02	rna	AG	S77 R79 N84 Q86 R143 M144 N148	S76 R78 N83 Q85 R142 M143 N147

Gene Ontology

	Molecular Function
GO:0000049	tRNA binding
GO:0003723	RNA binding
GO:0003729	mRNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0000028	ribosomal small subunit assembly
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:4v5a, PDBe:4v5a, PDBj:4v5a
PDBsum	4v5a
PubMed	17660830
UniProt	P17291\|RS7_THET8 Small ribosomal subunit protein uS7 (Gene Name=rpsG)

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