Structure of PDB 4v6u Chain AF

Receptor sequence
>4v6uAF (length=217) Species: 186497 (Pyrococcus furiosus DSM 3638) [Search protein sequence]
MSQEWKEYAKRVLDEWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEII
DVLLPEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGI
GHGKEVGIAIRKAINYAKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEG
SVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTVNFAKA
VFNALYNTNRVAISPEM
3D structure
PDB4v6u Promiscuous behaviour of archaeal ribosomal proteins: Implications for eukaryotic ribosome evolution.
ChainAF
Resolution6.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AF T71 V72 R73 M74 T75 S77 R82 R84 H102 K112 V166 I167 W184 Q186 T187 F188 T191 R192 T193 N196 T71 V72 R73 M74 T75 S77 R82 R84 H102 K112 V166 I167 W184 Q186 T187 F188 T191 R192 T193 N196
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4v6u, PDBe:4v6u, PDBj:4v6u
PDBsum4v6u
PubMed23222135
UniProtQ8U017|RS5_PYRFU Small ribosomal subunit protein uS5 (Gene Name=rps5)

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