Structure of PDB 4v8i Chain AD

Receptor sequence
>4v8iAD (length=208) Species: 274 (Thermus thermophilus) [Search protein sequence]
GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRP
SDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRL
DNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEK
SRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQ
LVIEFYSR
3D structure
PDB4v8i How hibernation factors RMF, HPF, and YfiA turn off protein synthesis.
ChainAD
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AD G2 I5 P7 V8 C9 R10 R14 R25 R35 R36 G41 Q42 H43 Q45 S52 Y54 Q62 R66 E72 R73 Q74 V133 D134 L135 P136 S137 S208 R209 G1 I4 P6 V7 C8 R9 R13 R24 R34 R35 G40 Q41 H42 Q44 S51 Y53 Q61 R65 E71 R72 Q73 V132 D133 L134 P135 S136 S207 R208
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v8i, PDBe:4v8i, PDBj:4v8i
PDBsum4v8i
PubMed22605777
UniProtP80373|RS4_THET8 Small ribosomal subunit protein uS4 (Gene Name=rpsD)

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