Structure of PDB 3j9w Chain AD

Receptor sequence
>3j9wAD (length=199) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence]
ARYTGPSWKLSRRLGISLSGTGKELEKRPYAPGPHGPGQRKKLSEYGLQL
QEKQKLRHMYGVNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYKL
GLARTRRQARQLVNHGHILVDGSRVDIPSYLVKPGQTIGVREKSRNLSII
KESVEVNNFVPEYLTFDAEKLEGTFTRLPERSELAPEINEALIVEFYSR
3D structure
PDB3j9w Structure of the Bacillus subtilis 70S ribosome reveals the basis for species-specific stalling.
ChainAD
Resolution3.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AD A2 P7 G34 R200 A1 P6 G33 R199
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3j9w, PDBe:3j9w, PDBj:3j9w
PDBsum3j9w
PubMed25903689
UniProtP21466|RS4_BACSU Small ribosomal subunit protein uS4 (Gene Name=rpsD)

[Back to BioLiP]