Structure of PDB 6sv4 Chain AB

Receptor sequence
>6sv4AB (length=134) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
NGAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAAS
LGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIA
NPKGEMKGSAITGPVGKECADLWPRVASNSGVVV
3D structure
PDB6sv4 RQT complex dissociates ribosomes collided on endogenous RQC substrate SDD1.
ChainAB
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AB N4 Q7 T9 K10 F11 R12 S14 A21 I37 V39 K40 S42 G43 S44 R45 N47 R48 L49 T61 K63 K71 K83 R88 F92 N1 Q4 T6 K7 F8 R9 S11 A18 I34 V36 K37 S39 G40 S41 R42 N44 R45 L46 T58 K60 K68 K80 R85 F89
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6sv4, PDBe:6sv4, PDBj:6sv4
PDBsum6sv4
PubMed32203490
UniProtP0CX41|RL23A_YEAST Large ribosomal subunit protein uL14A (Gene Name=RPL23A)

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