Structure of PDB 6gaz Chain AB

Receptor sequence
>6gazAB (length=220) Species: 9823 (Sus scrofa) [Search protein sequence]
NDLRDRILSEPLKHADFFNLKELFSVRSLFDARVHLGHKAGCRHRFMEPY
LFGSRLGQDIIDLEQTAAHLQLALNFTAHVAYREGIILFVSRHRQFAHLI
ETTARDCGEYAHTRYFKGGLLTNAPLLLGPGVRLPDLIIFLHTLNNVFEP
HVAVRDAAKMNIPTVGIVDTNCNPALITYPVPGNDDSPPAVRLFCRLFQV
AISRAKEKRRQVEALYRLQG
3D structure
PDB6gaz Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM.
ChainAB
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna AB R99 R146 R148 Y169 G172 G173 T176 N177 N199 N200 V201 V206 R209 D210 K213 R45 R92 R94 Y115 G118 G119 T122 N123 N145 N146 V147 V152 R155 D156 K159
BS02 MG AB H92 D223 D239 D240 H38 D169 D185 D186
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0061668 mitochondrial ribosome assembly
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6gaz, PDBe:6gaz, PDBj:6gaz
PDBsum6gaz
PubMed30089917
UniProtF1S001

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