Structure of PDB 7bdz Chain AAA

Receptor sequence
>7bdzAAA (length=129) Species: 9031 (Gallus gallus) [Search protein sequence]
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGS
TDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS
DGNGMNAWVAWRNRCKGTDVQAWIRGCRL
3D structure
PDB7bdz Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
ChainAAA
Resolution1.94 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.17: lysozyme.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ACT AAA S36 A42 N44 S36 A42 N44
BS02 ACT AAA R5 K33 F38 R5 K33 F38
BS03 ACT AAA F34 R114 F34 R114
BS04 ACT AAA Y23 G104 Y23 G104
BS05 ACT AAA R14 H15 D87 I88 R14 H15 D87 I88
BS06 RH AAA R14 H15 R14 H15
BS07 RH AAA K13 D18 K13 D18
Gene Ontology
Molecular Function
GO:0003796 lysozyme activity
GO:0005515 protein binding
GO:0016231 beta-N-acetylglucosaminidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0042802 identical protein binding
Biological Process
GO:0016998 cell wall macromolecule catabolic process
GO:0031640 killing of cells of another organism
GO:0042742 defense response to bacterium
GO:0050829 defense response to Gram-negative bacterium
GO:0050830 defense response to Gram-positive bacterium
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7bdz, PDBe:7bdz, PDBj:7bdz
PDBsum7bdz
PubMed33540880
UniProtP00698|LYSC_CHICK Lysozyme C (Gene Name=LYZ)

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