Structure of PDB 7av4 Chain AAA

Receptor sequence

>7av4AAA (length=567) Species: 554065 (Chlorella variabilis)

SPVAGQKYDYILVGGGTAACVLANRLSADGSKRVLVLEAGPDNTSRDVKI
PAAITRLFRSPLDWNLFSELQEQLAERQIYMARGRLLGGSSATNATLYHR
GAAGDYDAWGVEGWSSEDVLSWFVQAETNADFGPGAYHGSGGPMRVENPR
YTNKQLHTAFFKAAEEVGLTPNSDFNDWSHDHAGYGTFQVMQDKGTRADM
YRQYLKPVLGRRNLQVLTGAAVTKVNIDQAAGKAQALGVEFSTDGPTGER
LSAELAPGGEVIMCAGAVHTPFLLKHSGVGPSAELKEFGIPVVSNLAGVG
QNLQDQPACLTAAPVKEKYDGIAISDHIYNEKGQIRKRAIASYLLGGRGG
LTSTGSDRGAFVRTAGQALPDLQVRFVPGMALDPDGVSTYVRFAKFQSQG
LKWPSGITMQLIACRPQSTGSVGLKSADPFAPPKLSPGYLTDKDGADLAT
LRKGIHWARDVARSSALSEYLDGELFPGSGVVSDDQIDEYIRRSIHSSNA
ITGTCKMGNAGDSSSVVDNQLRVHGVEGLRVVDASVVPKIPGGQTGAPVV
MIAERAAALLTGKATIG

3D structure

• PDB: 7av4 Mechanism and dynamics of fatty acid photodecarboxylase.
• Chain: AAA
• Resolution: 1.936 Å

Enzymatic activity

• Enzyme Commision number: 4.1.1.106: fatty acid photodecarboxylase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	FAD	AAA	G90 G92 T93 A94 E114 A115 F134 W140 A158 R159 G160 G165 S166 N170 A171 T172 L173 M267 A297 V298 C340 A341 G342 H345 N575 A610 Q620 T621 G622	G14 G16 T17 A18 E38 A39 F58 W64 A82 R83 G84 G89 S90 N94 A95 T96 L97 M191 A221 V222 C264 A265 G266 H269 N499 A534 Q544 T545 G546

Gene Ontology

Molecular Function

• GO:0008812 choline dehydrogenase activity
• GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
• GO:0016829 lyase activity
• GO:0050660 flavin adenine dinucleotide binding

Biological Process

• GO:0019285 glycine betaine biosynthetic process from choline

Cellular Component

• GO:0009507 chloroplast
• GO:0016020 membrane

External links

• PDB: RCSB:7av4, PDBe:7av4, PDBj:7av4
• PDBsum: 7av4
• PubMed: 33833098
• UniProt: A0A248QE08|FAP_CHLVA Fatty acid photodecarboxylase, chloroplastic (Gene Name=FAP)