Structure of PDB 6yrz Chain AAA

Receptor sequence

>6yrzAAA (length=564) Species: 554065 (Chlorella variabilis) [Search protein sequence]

SPVAGQKYDYILVGGGTAACVLANRLSADGSKRVLVLEAGPDNTSRDVKI
PAAITRLFRSPLDWNLFSELQEQLAERQIYMARGRLLGGSSATNATLYHR
GAAGDYDAWGVEGWSSEDVLSWFVQAETNADFGPGAYHGSGGPMRVENPR
YTNKQLHTAFFKAAEEVGLTPNSDFNDWSHDHAGYGTFQVMQDKGTRADM
YRQYLKPVLGRRNLQVLTGAAVTKVNIDQAQALGVEFSTDGPTGERLSAE
LAPGGEVIMCAGAVHTPFLLKHSGVGPSAELKEFGIPVVSNLAGVGQNLQ
DQPACLTAAPVKEKYDGIAISDHIYNEKGQIRKRAIASYLLGGRGGLTST
GCDRGAFVRTAGQALPDLQVRFVPGMALDPDGVSTYVRFAKFQSQGLKWP
SGITMQLIACRPQSTGSVGLKSADPFAPPKLSPGYLTDKDGADLATLRKG
IHWARDVARSSALSEYLDGELFPGSGVVSDDQIDEYIRRSIHSSNAITGT
CKMGNAGDSSSVVDNQLRVHGVEGLRVVDASVVPKIPGGQTGAPVVMIAE
RAAALLTGKATIGA

3D structure

PDB

6yrz Mechanism and dynamics of fatty acid photodecarboxylase.

Chain

AAA

Resolution

1.824 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

4.1.1.106: fatty acid photodecarboxylase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	FAD	AAA	G90 G92 T93 A94 E114 A115 F134 W140 A158 R159 G165 S166 N170 A171 T172 L173 V298 A341 G342 H345 N575 A610 Q620 T621 G622	G14 G16 T17 A18 E38 A39 F58 W64 A82 R83 G89 S90 N94 A95 T96 L97 V222 A261 G262 H265 N495 A530 Q540 T541 G542
BS02	PJ8	AAA	T430 V453 G455 T465 Y466 Q486	T350 V373 G375 T385 Y386 Q406
BS03	CO2	AAA	R451 N575	R371 N495

Gene Ontology

	Molecular Function
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors
GO:0050660	flavin adenine dinucleotide binding

View graph for
Molecular Function

External links

PDB	RCSB:6yrz, PDBe:6yrz, PDBj:6yrz
PDBsum	6yrz
PubMed	33833098
UniProt	A0A248QE08\|FAP_CHLVA Fatty acid photodecarboxylase, chloroplastic (Gene Name=FAP)

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